You don't need to replace the default (rotated) logos as the game will only display them when it can not find a config file for the logo.
If you downloaded my FM2007 rotated logos, then for each league their would be a background_left, background_right, normal and small folder and a config file inside the league folder. So the england/premiership folder
Should look something like this
The config file in the folder (without any logos) is the one that will cause the normal rotated logos to display on the news screen (basicaly maps the logos from the normal folder to the huge logos, so saves the need to have the normal sized logo graphics twice, which reduces the size of the download).
If you have deleted this config file then just redownload the
Prem Huge config from here and unzip the config.xml into your premiership folder (for it to work it has to be in the parent folder to the normal
prem logos, so put the config file into the same folder as your normal folder for the
prem).
(If none of the english rotated huge logos are showing, it'll be easier for you to delete the english logos and redownload the pack)